Botrytis can be much more aggressive than Alternaria in cherry blossoms and fruit

29 Apr 2026
803

A rapid detection system has established that Botrytis can be far more aggressive than Alternaria on cherry flowers and fruits.

In the final presentation of the project, which developed a rapid detection system in 48 hours (and will be made available to the industry), project leader Marcela Esterio highlighted that at least three Alternaria species never previously reported in cherries in Chile were identified, along with a new species never recorded worldwide in stone fruits.

As a legacy from the table grape sector, rapid disease detection analysis is now becoming a reality in cherry production as well.

The diagnostic technique enables

The diagnostic technique makes it possible to determine in real time – within just 48 hours and simultaneously – the potential level of infection by Botrytis spp. and Alternaria spp. in cherries. The results were presented following a couple of seasons and trials conducted in the country.

The project, named Check Fast Cherry, was supported by the Fundación para la Innovación Agraria (FIA) and the Faculty of Agronomic Sciences of the University of Chile. The symbolic closing ceremony took place on Wednesday, April 15, during which academic and project leader Marcela Esterio presented part of the results achieved and future prospects.

A system designed for the industry

The project, titled “Rapid system for the simultaneous detection of Alternaria spp. and Botrytis spp. in cherry using qPCR-HRM / TaqMan,” also received support from the industry and its associations, including Fedefruta F.G., as well as major companies in the national agricultural sector.

According to Esterio, the goal of the tool – for which a patent is being pursued – is to enable Check Fast Cherry to optimize rot management in cherries, produce healthy, high-quality fruit and, consequently, restore profitability to this key crop for Chile.

This system also makes it possible to promptly and in real time determine the level of fungal pathogen infection, helping the cherry industry make critical decisions, such as the selection of the most effective products to control the predominant fungal population, while also promoting a more sustainable crop management.

More threats than expected

To develop, implement, and validate the Check Fast Cherry technique, the research team began by studying the fungal microbiota of cherry, both during flowering and pre-harvest. This work generated valuable insights into these two fungal genera.

For example, three groups (clades) of Botrytis cinerea were identified. As for Alternaria, surprisingly, more than seven species were detected, including three never previously reported in cherries in Chile and one completely new worldwide for this fruit.

The research also demonstrated that, on cherry flowers and fruits, Botrytis is far more aggressive than Alternaria. However, susceptibility to both pathogens varies depending on the variety, geographical location, and climatic conditions during flowering and pre-harvest.

The preliminary study also revealed another unexpected result: Alternaria does not require wounds to penetrate the fruit.

During the event, Esterio also presented an evaluation of the effectiveness of different fungicide solutions available on the market, with the aim of identifying the most effective combinations for controlling these diseases.

Source: redagricola.com

Image source: Stefano Lugli


Cherry Times - All rights reserved

What to read next

Engineering of cherry rootstocks to increase virus resistance

Rootstocks

05 Feb 2024

Regarding rootstocks, one of the most promising approaches to increase plant resistance to viruses is post-transcriptional gene silencing, which employs RNA interference (RNAi) to prevent pathogenicity and virus replication.

Germany is the third largest importer of cherries

Consumption Markets

09 May 2023

Germany is the third-largest importer of cherries in the world after China/Hong Kong and Russia. From 2010 to 2021, between 52 and 77 percent of the cherries consumed in Germany were imported, with the majority of imports originating in other EU member states.

In evidenza

Albanian home-grown cherries are targeting high-end European markets

Specialties

26 Oct 2026

Godolesh, near Elbasan in Albania, is a distinctive cherry-growing area. Its native variety, annual output of around 700 tonnes and sustainable practices support ambitions to reach European markets, from Italy to Germany, building on quality, origin and tradition.

Frequent rainfall is putting Chilean cherry production and the cherry market at risk

Production

23 Oct 2026

Spring rains in Chile have split early cherries in the north, while damage in O’Higgins, which accounts for over 80% of production, remains marginal so far. Growers are monitoring fungal disease, saturated soils and potential impacts on Chile’s 2026/27 cherry crop.

Tag Popolari