Botrytis can be much more aggressive than Alternaria in cherry blossoms and fruit

29 Apr 2026
671

A rapid detection system has established that Botrytis can be far more aggressive than Alternaria on cherry flowers and fruits.

In the final presentation of the project, which developed a rapid detection system in 48 hours (and will be made available to the industry), project leader Marcela Esterio highlighted that at least three Alternaria species never previously reported in cherries in Chile were identified, along with a new species never recorded worldwide in stone fruits.

As a legacy from the table grape sector, rapid disease detection analysis is now becoming a reality in cherry production as well.

The diagnostic technique enables

The diagnostic technique makes it possible to determine in real time – within just 48 hours and simultaneously – the potential level of infection by Botrytis spp. and Alternaria spp. in cherries. The results were presented following a couple of seasons and trials conducted in the country.

The project, named Check Fast Cherry, was supported by the Fundación para la Innovación Agraria (FIA) and the Faculty of Agronomic Sciences of the University of Chile. The symbolic closing ceremony took place on Wednesday, April 15, during which academic and project leader Marcela Esterio presented part of the results achieved and future prospects.

A system designed for the industry

The project, titled “Rapid system for the simultaneous detection of Alternaria spp. and Botrytis spp. in cherry using qPCR-HRM / TaqMan,” also received support from the industry and its associations, including Fedefruta F.G., as well as major companies in the national agricultural sector.

According to Esterio, the goal of the tool – for which a patent is being pursued – is to enable Check Fast Cherry to optimize rot management in cherries, produce healthy, high-quality fruit and, consequently, restore profitability to this key crop for Chile.

This system also makes it possible to promptly and in real time determine the level of fungal pathogen infection, helping the cherry industry make critical decisions, such as the selection of the most effective products to control the predominant fungal population, while also promoting a more sustainable crop management.

More threats than expected

To develop, implement, and validate the Check Fast Cherry technique, the research team began by studying the fungal microbiota of cherry, both during flowering and pre-harvest. This work generated valuable insights into these two fungal genera.

For example, three groups (clades) of Botrytis cinerea were identified. As for Alternaria, surprisingly, more than seven species were detected, including three never previously reported in cherries in Chile and one completely new worldwide for this fruit.

The research also demonstrated that, on cherry flowers and fruits, Botrytis is far more aggressive than Alternaria. However, susceptibility to both pathogens varies depending on the variety, geographical location, and climatic conditions during flowering and pre-harvest.

The preliminary study also revealed another unexpected result: Alternaria does not require wounds to penetrate the fruit.

During the event, Esterio also presented an evaluation of the effectiveness of different fungicide solutions available on the market, with the aim of identifying the most effective combinations for controlling these diseases.

Source: redagricola.com

Image source: Stefano Lugli


Cherry Times - All rights reserved

What to read next

New opportunities for improving fruit firmness through the genome sequencing of Chinese cherry

Breeding

10 Oct 2024

By comparing the Chinese cherry genome with those of other Prunus species it was observed that the two species diverged around 18.34 million years ago. However, Prunus pseudocerasus has much softer fruits compared to sweet cherry.

Apulia (Italy), greenhouse cherries: 2025 harvest begins late but with excellent quality

Covers

16 Apr 2025

The 2025 greenhouse cherry harvest has started in Apulia: unstable weather caused a delay of over a week, but the fruit shows excellent quality, consistent size and good sugar content, with strong demand already seen in early market trends.

In evidenza

The Chinese market is opening up to South African cherries

Markets

17 Sep 2026

The new protocol opens China to South African cherries from the 2026/27 season. With 819 hectares planted, rising exports and a 2-3 week window before Chilean peak volumes, South Africa is targeting zero-tariff access, new investment and a stronger presence across Asia.

The cherry harvest in the north-west of the United States was lower than forecast

Production

17 Sep 2026

In 2026, cherry production in the Yakima Valley and the U.S. Northwest is heading toward 17 million boxes. Lower volumes, firmer prices and solid demand support growers, while Rainier cherries face losses from spring frost, wind and rain. The market remains resilient.

Tag Popolari